PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS65358.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family MYB_related
Protein Properties Length: 110aa    MW: 12379.2 Da    PI: 11.1757
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS65358.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding315.9e-101232346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W++Ia++mg +Rt++++k++w++
       EPS65358.1  1 RWSAIAAHMG-NRTDNEIKNYWNT 23
                     4*********.***********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.6129IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.0E-12136IPR009057Homeodomain-like
CDDcd001671.61E-6125No hitNo description
PfamPF002496.9E-8123IPR001005SANT/Myb domain
SuperFamilySSF466896.24E-8136IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
RWSAIAAHMG NRTDNEIKNY WNTRLKKRLT RMGIDPVTHK PRNGIAAQSK HAAHLSHMAQ  60
WEAARLEAEA RLAGRESRLP HSDVQKKTIA AAPPHPPPPC LDVLKVWQAT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847598.15e-39PREDICTED: myb-related protein 306-like
SwissprotP800749e-22MYB1_PHYPA; Myb-related protein Pp1 (Fragment)
TrEMBLS8DQP92e-76S8DQP9_9LAMI; Uncharacterized protein (Fragment)
STRINGGLYMA02G12266.12e-35(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.12e-24myb domain protein 106
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]